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TrajectoryFile, TopologyFile -> WeightedCorrelationNetwork
Calculate cross-correlation matrices from molecular dynamics trajectories to construct a weighted network of amino acid residues.
Problem it solves
Analyzing raw molecular dynamics trajectories for collective motions is computationally expensive and difficult to visualize.
Consumes
Emits
The real projects this mechanism was found in. Attribution is the point — this is how the best teams actually do it.